Santa Fe Institute

1996 Working Papers

Title: Coherent Noise, Scale Invariance, and Intermittency in Large Systems
Author(s): Kim Sneppen, M. Newman
Files: [abstract] [pdf]
Paper #: 96-12-095
Date: Nov. 30, 1996
Title: Community Assembly in a Model Ecosystem
Author(s): Peter Hraber, Bruce Milne
Files: [abstract] [pdf]
Paper #: 96-12-094
Date: Nov. 30, 1996
Title: Asset Pricing Under Endogenous Expectations in an Artificial Stock Market
Author(s): W. Arthur, John Holland, Blake LeBaron, Richard Palmer, Paul Tayler
Files: [abstract] [pdf]
Paper #: 96-12-093
Date: Nov. 30, 1996
Title: Structure and Strategy in Collective Action: Communication and Coordination in Social Networks
Author(s): Michael Chwe
Files: [abstract] [pdf]
Paper #: 96-12-092
Date: Nov. 30, 1996
Title: Evidence for Adaptive Evolutionary Convergence in the Base Composition of Single-Stranded RNA
Author(s): Erik Schultes, Peter Hraber, Thomas LaBean
Files: [abstract] [pdf]
Paper #: 96-12-091
Date: Nov. 30, 1996
Title: Global Similarities in Nucleotide Base Composition Among Disparate Functional Classes of Single-Stranded RNA
Author(s): Erik Schultes, Peter Hraber, Thomas LaBean
Files: [abstract] [pdf]
Paper #: 96-12-090
Date: Nov. 30, 1996
Title: Somatic Mutation Leads to Efficient Affinity Maturation When Centrocytes Recycle Back to Centroblasts
Author(s): Mihaela Oprea, Alan Perelson
Files: [abstract] [pdf]
Paper #: 96-12-088
Date: Nov. 30, 1996
Title: Spectral Representation of Neutral Landscapes
Author(s): Timothy Keitt
Files: [abstract] [pdf]
Paper #: 96-12-087
Date: Nov. 30, 1996
Title: The Repton Model of Gel Electrophoresis
Author(s): G. Barkema, M. Newman
Files: [abstract] [pdf]
Paper #: 96-12-086
Date: Nov. 30, 1996
Title: Neutral Networks in Protein Space: A Computational Study Based on Knowledge-Based Potentials of Mean Force
Author(s): Aderonke Babajide, Ivo Hofacker, Manfred Sippl, Peter Stadler
Files: [abstract] [pdf]
Paper #: 96-12-085
Date: Nov. 30, 1996
Title: Expectational Diversity in Monetary Economies
Author(s): William Brock, Patrick de Fontouvelle
Files: [abstract] [pdf]
Paper #: 96-11-084
Date: Nov. 1, 1996
Title: Target Cell Limited and Immune Control Models of HIV Infection: A Comparison
Author(s): Rob De Boer, Alan Perelson
Files: [abstract] [pdf]
Paper #: 96-11-083
Date: Nov. 1, 1996
Title: Evolution on Random Structures
Author(s): Christian Reidys, Simon Fraser
Files: [abstract] [pdf]
Paper #: 96-11-082
Date: Oct. 31, 1996
Title: Mathematical and Computational Challenges in Population Biology and Ecosystem Science
Author(s): Simon Levin, Bryan Grenfall, Alan Hastings, Alan Perelson
Files: [abstract] [pdf]
Paper #: 96-11-081
Date: Nov. 1, 1996
Title: Large Scale Traffic Simulations
Author(s): Kai Nagel, Marcus Rickert, Christopher Barrett
Files: [abstract] [pdf]
Paper #: 96-10-080
Date: Oct. 1, 1996
Title: The Unknown and the Unknowable
Author(s): Joseph Traub
Files: [abstract] [pdf]
Paper #: 96-10-079
Date: Oct. 1, 1996
Title: Treatment Under Ambiguity
Author(s): Charles Manski
Files: [abstract] [pdf]
Paper #: 96-10-078
Date: Oct. 1, 1996
Title: The Structure of the Synchronizing-CA Landscape
Author(s): Wim Hordijk
Files: [abstract] [pdf]
Paper #: 96-09-077
Date: Sept. 1, 1996
Title: Oscillatory Behavior of the Rate of Escape Through an Unstable Limit Cycle
Author(s): Robert Maier, Daniel Stein
Files: [abstract] [pdf]
Paper #: 96-09-076
Date: Sept. 1, 1996
Title: Price Variations in a Stock Market With Many Agents
Author(s): Per Bak, M. Paczuski, Martin Shubik
Files: [abstract] [pdf]
Paper #: 96-09-075
Date: Sept. 1, 1996
Title: Computation in Cellular Automata: A Selected Review
Author(s): Melanie Mitchell
Files: [abstract] [pdf]
Paper #: 96-09-074
Date: Sept. 1, 1996
Title: Embedded-Particle Computation in Evolved Cellular Automata
Author(s): Wim Hordijk, James Crutchfield, Melanie Mitchell
Files: [abstract] [pdf]
Paper #: 96-08-073
Date: Aug. 1, 1996
Title: Investigations
Author(s): Stuart Kauffman
Files: [abstract] [pdf]
Paper #: 96-08-072
Date: Aug. 1, 1996
Title: Natural Rationality
Author(s): V. Darley, Stuart Kauffman
Files: [abstract] [pdf]
Paper #: 96-08-071
Date: Aug. 1, 1996
Title: Collective-Induced Computation
Author(s): Jordi Delgado, Ricard Solé
Files: [abstract] [pdf]
Paper #: 96-08-070
Date: Aug. 1, 1996
Title: Statistical Mechanics Approaches to Socioeconomic Behavior
Author(s): Steven Durlauf
Files: [abstract] [pdf]
Paper #: 96-08-069
Date: Aug. 1, 1996
Title: Entrepreneurs: Self-Confident Agents Busting Self-Confirming Equilibria
Author(s): Michael Ryall
Files: [abstract] [pdf]
Paper #: 96-08-068
Date: Aug. 1, 1996
Title: The Markov Process Behind Limited Information Trading
Author(s): Elizabeth Newlon
Files: [abstract] [pdf]
Paper #: 96-08-067
Date: Aug. 1, 1996
Title: Managing Change and the Success of Niche Products
Author(s): Kieron Meagher
Files: [abstract] [pdf]
Paper #: 96-08-066
Date: Aug. 1, 1996
Title: Local Hillclimbing on an Economic Landscape
Author(s): David Kane
Files: [abstract] [pdf]
Paper #: 96-08-065
Date: Aug. 1, 1996
Title: The Localization of Interaction and Learning in the Repeated Prisoner's Dilemma
Author(s): Robert Hoffmann, Nigel Waring
Files: [abstract] [pdf]
Paper #: 96-08-064
Date: Aug. 1, 1996
Title: The Mixed Strategy Equilibria and Adaptive Dynamics in the Bar Problem
Author(s): John Cheng
Files: [abstract] [pdf]
Paper #: 96-08-063
Date: Aug. 1, 1996
Title: Equilibrium Selection in the Stochastic Iterated Prisoner's Dilemma
Author(s): Susan Bennett
Files: [abstract] [pdf]
Paper #: 96-08-062
Date: Aug. 1, 1996
Title: Limits to Science or Limits to Epistemology?
Author(s): Steven Durlauf
Files: [abstract] [pdf]
Paper #: 96-08-061
Date: Aug. 1, 1996
Title: Majority-Vote Cellular Automata, Ising Dynamics, and P-Completeness
Author(s): Cristopher Moore
Files: [abstract] [pdf]
Paper #: 96-08-060
Date: Aug. 1, 1996
Title: Lattice Molecular Automaton (LMA): A Physico-Chemical Simulation System for Constructive Molecular Dynamics
Author(s): Bernd Mayer, Steen Rasmussen
Files: [abstract] [pdf]
Paper #: 96-08-059
Date: Aug. 1, 1996
Title: Simulation and Dynamics of Entropy Driven, Molecular Self-Assembly Processes
Author(s): Bernd Mayer, Gottfried Köhler, Steen Rasmussen
Files: [abstract] [pdf]
Paper #: 96-08-058
Date: Aug. 1, 1996
Title: Generation of Higher Order Emergent Structures
Author(s): Nils Baas, Michael Olesen, Steen Rasmussen
Files: [abstract] [pdf]
Paper #: 96-08-057
Date: Aug. 1, 1996
Title: Network Traffic as a Self-Organized Critical Phenomenon
Author(s): Kai Nagel, Steen Rasmussen, Christopher Barrett
Files: [abstract] [pdf]
Paper #: 96-08-056
Date: Aug. 1, 1996
Title: A Note on Simulation and Dynamical Hierarchies
Author(s): Steen Rasmussen, Nils Baas, Christopher Barrett, Michael Olesen
Files: [abstract] [pdf]
Paper #: 96-08-055
Date: Aug. 1, 1996
Title: Finite Populations Induce Metastability in Evolutionary Search
Author(s): Erik van Nimwegen, James Crutchfield, Melanie Mitchell
Files: [abstract] [pdf]
Paper #: 96-08-054
Date: Aug. 1, 1996
Title: The Emergence of Simple Ecologies of Skill: A Hypercycle Approach to Economic Organization
Author(s): John Padgett
Files: [abstract] [pdf]
Paper #: 96-08-053
Date: Aug. 1, 1996
Title: Stochastic Resonance in Models of Neuronal Ensembles Revisited
Author(s): Dante Chialvo, André Longtin, Johannes Müller-Gerking
Files: [abstract] [pdf]
Paper #: 96-08-052
Date: Aug. 1, 1996
Title: Turbulent Landscapes: A Dialogue
Author(s): James Crutchfield, Ned Kahn
Files: [abstract] [pdf]
Paper #: 96-07-051
Date: July 1, 1996
Title: Statistical Complexity of Simple 1D Spin Systems
Author(s): James Crutchfield, David Feldman
Files: [abstract] [pdf]
Paper #: 96-07-050
Date: July 1, 1996
Title: Extinction: Bad Genes or Weak Chaos?
Author(s): Ricard Solé, Jordi Bascompte, Susanna Manrubia
Files: [abstract] [pdf]
Paper #: 96-07-049
Date: July 1, 1996
Title: Computational Political Economy
Author(s): Ken Kollman, John Miller, Scott Page
Files: [abstract] [pdf]
Paper #: 96-07-048
Date: July 1, 1996
Title: Landscapes and Molecular Evolution
Author(s): Peter Schuster
Files: [abstract] [pdf]
Paper #: 96-07-047
Date: July 1, 1996
Title: The Algebraic Theory of Recombination Spaces
Author(s): Peter Stadler, Günter Wagner
Files: [abstract] [pdf]
Paper #: 96-07-046
Date: July 1, 1996
Title: Quantitative Image Analysis of HIV-1 Infection in Lymphoid Tissue
Author(s): A. Haase, K. Henry, M. Zupancic, G. Sedgewick, R. Faust
Files: [abstract] [pdf]
Paper #: 96-07-045
Date: July 1, 1996
Title: Assessing the Reliability of RNA Folding Using Statistical Mechanics
Author(s): Martijn Huynen, Robin Gutell, Danielle Konings
Files: [abstract] [pdf]
Paper #: 96-07-044
Date: July 1, 1996
Title: Evolutionary Dynamics in Game-Theoretic Models
Author(s): Kristian Lindgren
Files: [abstract] [pdf]
Paper #: 96-06-043
Date: June 1, 1996
Title: The Swarm Simulation System: A Toolkit for Building Multi-Agent Simulations
Author(s): Nelson Minar, Roger Burkhart, Christopher Langton, Manor Askenazi
Files: [abstract] [pdf]
Paper #: 96-06-042
Date: June 1, 1996
Title: From Infoware to Infowar
Author(s): Joseph Traub
Files: [abstract] [pdf]
Paper #: 96-06-041
Date: June 1, 1996
Title: New Results on Deterministic Pricing of Financial Derivatives
Author(s): A. Papageorgiou, Joseph Traub
Files: [abstract] [pdf]
Paper #: 96-06-040
Date: June 1, 1996
Title: A Second Metamorphosis of Science: A Second View
Author(s): E. Jackson
Files: [abstract] [pdf]
Paper #: 96-06-039
Date: June 1, 1996
Title: An Efficient Method to Estimate Bagging's Generalization Error
Author(s): David Wolpert, William Macready
Files: [abstract] [pdf]
Paper #: 96-06-038
Date: June 1, 1996
Title: Closed-Form Analytic Maps in One and Two Dimensions Can Simulate Turing Machines
Author(s): Pascal Koiran, Cristopher Moore
Files: [abstract] [pdf]
Paper #: 96-06-037
Date: June 1, 1996
Title: Imperfect Collective Security and Arms Race Dynamics: Why a Little Cooperation Can Make a Big Difference
Author(s): Joshua Epstein
Files: [abstract] [pdf]
Paper #: 96-05-036
Date: May 1, 1996
Title: The Barrier of Objects: From Dynamical Systems to Bounded Organizations
Author(s): Walter Fontana, Leo Buss
Files: [abstract] [pdf]
Paper #: 96-05-035
Date: May 1, 1996
Title: Isotropy and Metastable States: The Landscape of the XY Hamiltonian Revisited
Author(s): Ricardo Garcia-Pelayo, Peter Stadler
Files: [abstract] [pdf]
Paper #: 96-05-034
Date: May 1, 1996
Title: Gene-Culture Coevolutionary Theory
Author(s): Marcus Feldman, Kevin Land
Files: [abstract] [pdf]
Paper #: 96-05-033
Date: May 1, 1996
Title: Deleterious Mutations, Variable Epistatic Interactions, and the Evolution of Recombination
Author(s): Sarah Otto, Marcus Feldman
Files: [abstract] [pdf]
Paper #: 96-05-032
Date: May 1, 1996
Title: Population Genetic Perspectives on the Evolution of Recombination
Author(s): Marcus Feldman, Sarah Otto, Freddy Christiansen
Files: [abstract] [pdf]
Paper #: 96-05-031
Date: May 1, 1996
Title: Individual Versus Social Learning: Evolutionary Analysis in a Fluctuating Environment
Author(s): Marcus Feldman, Kenichi Aoki, Jochen Kumm
Files: [abstract] [pdf]
Paper #: 96-05-030
Date: May 1, 1996
Title: Neural Net Representations of Empirical Protein Potentials
Author(s): Tal Grossman, Robert Farber, Alan Lapedes
Files: [abstract] [pdf]
Paper #: 96-05-029
Date: May 1, 1996
Title: Increasing Returns and the Two Worlds of Business
Author(s): W. Arthur
Files: [abstract] [pdf]
Paper #: 96-05-028
Date: May 1, 1996
Title: Mapping in Random Structures
Author(s): Christian Reidys
Files: [abstract] [pdf]
Paper #: 96-05-027
Date: May 1, 1996
Title: How Does Complexity Arise in Evolution?
Author(s): Peter Schuster
Files: [abstract] [pdf]
Paper #: 96-05-026
Date: May 1, 1996
Title: A Brief History of Cultural Evolution: Stages, Agents, and Tinkering
Author(s): Jonathan Haas
Files: [abstract] [pdf]
Paper #: 96-05-025
Date: May 1, 1996
Title: Autocatalytic Networks with Intermediates I: Irreversible Reactions
Author(s): Robert Hecht, Robert Happel, Peter Schuster, Peter Stadler
Files: [abstract] [pdf]
Paper #: 96-05-024
Date: May 1, 1996
Title: Dynamical Recognizers: Real-time Language Recognition by Analog Computers
Author(s): Cristopher Moore
Files: [abstract] [pdf]
Paper #: 96-05-023
Date: May 1, 1996
Title: Population Games
Author(s): Lawrence Blume
Files: [abstract] [pdf]
Paper #: 96-04-022
Date: April 1, 1996
Title: How the Economy Organizes Itself in Space: A Survey of the New Economic Geography
Author(s): Paul Krugman
Files: [abstract] [pdf]
Paper #: 96-04-021
Date: April 1, 1996
Title: Evolution of Trading Structures
Author(s): Yannis Ioannides
Files: [abstract] [pdf]
Paper #: 96-04-020
Date: April 1, 1996
Title: Identification of Anonymous Endogenous Interactions
Author(s): Charles Manski
Files: [abstract] [pdf]
Paper #: 96-04-019
Date: March 31, 1996
Title: Asset Price Behavior in Complex Environments
Author(s): William Brock
Files: [abstract] [pdf]
Paper #: 96-04-018
Date: April 1, 1996
Title: Passively Learning Finite Automata
Author(s): Kevin Murphy
Files: [abstract] [pdf]
Paper #: 96-04-017
Date: March 31, 1996
Title: Algorithm Independence Properties and RNA Secondary Structure Predicions
Author(s): Manfred Tacker, Peter Stadler, Erich Bornberg-Bauer, Ivo Hofacker, Peter Schuster
Files: [abstract] [pdf]
Paper #: 96-04-016
Date: March 31, 1996
Title: Particle Hopping Models and Traffic Flow Theory
Author(s): Kai Nagel
Files: [abstract] [pdf]
Paper #: 96-04-015
Date: April 1, 1996
Title: A Theory of Biochemical Organization, Metabolic Pathways, and Evolution
Author(s): Harold Morowitz
Files: [abstract] [pdf]
Paper #: 96-04-014
Date: April 1, 1996
Title: Time and Money
Author(s): Martin Shubik
Files: [abstract] [pdf]
Paper #: 96-03-013
Date: March 1, 1996
Title: Physics: The Opening to Complexity
Author(s): Philip Anderson
Files: [abstract] [pdf]
Paper #: 96-03-012
Date: March 1, 1996
Title: Active Nonlinear Tests (ANTs) of Complex Simulation Models
Author(s): John Miller
Files: [abstract] [pdf]
Paper #: 96-03-011
Date: Feb. 29, 1996
Title: On Reality and Models
Author(s): Joseph Traub
Files: [abstract] [pdf]
Paper #: 96-03-010
Date: March 1, 1996
Title: On 2-Armed Gaussian Bandits and Optimization
Author(s): William Macready, David Wolpert
Files: [abstract] [pdf]
Paper #: 96-03-009
Date: Feb. 29, 1996
Title: An Incompleteness Theorem for Calculating the Future
Author(s): David Wolpert
Files: [abstract] [pdf]
Paper #: 96-03-008
Date: March 1, 1996
Title: Creating Alternative Cultural Histories in the Prehistoric Southwest: Agent-Based Modeling in Archaeology
Author(s): George Gumerman, Timothy Kohler
Files: [abstract] [pdf]
Paper #: 96-03-007
Date: Feb. 29, 1996
Title: Question Marks About the Period of Punctuation
Author(s): Aviv Bergman, Marcus Feldman
Files: [abstract] [pdf]
Paper #: 96-02-006
Date: Feb. 1, 1996
Title: Local Minima in the Graph Bipartitioning Problem
Author(s): Bärbel Krakhofer, Peter Stadler
Files: [abstract] [pdf]
Paper #: 96-02-005
Date: Jan. 31, 1996
Title: HIV-1 Dynamics In Vivo: Virion Clearance Rate, Infected Cell Lifespan, and Viral Generation Time
Author(s): Alan Perelson, Avidan Neumann, Martin Markowitz, John Leonard, David Ho
Files: [abstract] [pdf]
Paper #: 96-02-004
Date: Jan. 31, 1996
Title: NP Completeness of Kauffman’s N-k Model, a Tuneably Rugged Fitness Landscape
Author(s): Edward Weinberger
Files: [abstract] [pdf]
Paper #: 96-02-003
Date: Jan. 31, 1996
Title: Metazoan Complexity and Evolution: Is There a Trend?
Author(s): Daniel McShea
Files: [abstract] [pdf]
Paper #: 96-01-002
Date: Jan. 1, 1996
Title: The Outer Limits: In Search of the “Unknowable” in Science
Author(s): John Casti
Files: [abstract] [pdf]
Paper #: 96-01-001
Date: Jan. 1, 1996

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