Working Papers List
1997
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| Title: | Zones of Cooperation in Demographic Prisoner’s Dilemma |
| Author(s): | Joshua M. Epstein |
| Files: | [abstract] [gzipped postscript] [postscript] [pdf] |
| Paper #: | 97-12-094 |
| Title: | A Stochastic Infinite-Horizon Economy with Secured Lending or Unsecured Lending and Bankruptcy |
| Author(s): | I. Karatzas, Martin Shubik, and W. Sudderth |
| Files: | [abstract] [gzipped postscript] [postscript] [pdf] |
| Paper #: | 97-12-093 |
| Paper #: | 97-12-092 |
| (Paper Withdrawn) | |
| Title: | Games of Status Part I: Modeling Considerations |
| Author(s): | Tom Quint and Martin Shubik |
| Files: | [abstract] [gzipped postscript] [postscript] [pdf] |
| Paper #: | 97-12-091 |
| Title: | Spatial Autocorrelation, Dispersal, and the Maintenance of Source-Sink Populations |
| Author(s): | Timothy H. Keitt |
| Files: | [abstract] [postscript] |
| Paper #: | 97-12-090 |
| Title: | Dynamics of North American Breeding Bird Populations |
| Author(s): | Timothy H. Keitt and H. Eugene Stanley |
| Files: | [abstract] [postscript] |
| Paper #: | 97-12-089 |
| Title: | Correlated Mutations in Protein Sequences: Phylogenetic and Structural Effects |
| Author(s): | Alan S. Lapedes, B. G. Giraud, L. C. Liu, and G. D. Stormo |
| Files: | [abstract] [postscript] |
| Paper #: | 97-12-088 |
| Title: | Self-Dissimilarity: An Empirical Measure of Complexity |
| Author(s): | David H. Wolpert and William G. Macready |
| Files: | [abstract] [postscript] |
| Paper #: | 97-12-087 |
| Title: | Criticality and Scaling in Evolutionary Ecology |
| Author(s): | Ricard V. Solé, Suzanna C. Manrubia, Michael Benton, Stuart A. Kauffman, and Per Bak |
| Files: | [abstract] [postscript] |
| Paper #: | 97-12-086 |
| Title: | Red Queen Dynamics, Competition, and Critical Points in a Model of RNA Virus Quasispecies |
| Author(s): | Ricard V. Solé, Ramon Ferrer, Isabel Gonzalez-Garcia, Josep Quer, and Esteban Domingo |
| Files: | [abstract] [postscript] |
| Paper #: | 97-11-085 |
| Title: | Order Parameters, Lyapunov Exponents, and Control in Random Boolean Networks |
| Author(s): | Bartolo Luque, Claudia Blanc, and Ricard V. Solé |
| Files: | [abstract] [postscript] |
| Paper #: | 97-11-084 |
| Title: | Statistical Measures of Complexity for Strongly Interacting Systems |
| Author(s): | Ricard V. Solé, Claudia Blanc, and Bartolo Luque |
| Files: | [abstract] [postscript] |
| Paper #: | 97-11-083 |
| Title: | Fitness Landscapes Arising from the Sequence-Structure Map of Biopolymers |
| Author(s): | Peter F. Stadler |
| Files: | [abstract] [postscript] |
| Paper #: | 97-11-082 |
| Title: | Shaping Space: The Possible and the Attainable in RNA Genotype-Phenotype Mapping |
| Author(s): | Walter Fontana and Peter Schuster |
| Files: | [abstract] [postscript] |
| Paper #: | 97-11-081 |
| Title: | What Should Policymakers Know About Economic Complexity? |
| Author(s): | Steven N. Durlauf |
| Files: | [abstract] [gzipped postscript] [postscript] [pdf] |
| Paper #: | 97-10-080 |
| Title: | Fundamental Sources of Unpredictability |
| Author(s): | Murray Gell-Mann |
| Files: | [abstract] [gzipped postscript] [postscript] [pdf] |
| Paper #: | 97-09-079 |
| Title: | Using Lazy Evaluation to Simulate Realistic- Size Repertoires in Models of the Immune System |
| Author(s): | D. J. Smith, Stephanie Forrest, D. H. Ackley, and Alan S. Perelson |
| Files: | [abstract] [pdf] |
| Paper #: | 97-09-078 |
| Title: | Learning from Mistakes |
| Author(s): | Dante R. Chialvo and Per Bak |
| Files: | [abstract] [postscript] [pdf] |
| Paper #: | 97-08-077 |
| Title: | Commuting Cellular Automata |
| Author(s): | Cristopher Moore and Timothy Boykett |
| Files: | [abstract] [gzipped postscript] [postscript] [pdf] |
| Paper #: | 97-08-076 |
| Title: | Causality in Complex Systems |
| Author(s): | Andreas Wagner |
| Files: | [abstract] [pdf] |
| Paper #: | 97-08-075 |
| Title: | A Computational Genomics Approach to the Identification of Gene Networks |
| Author(s): | Andreas Wagner |
| Files: | [abstract] [postscript] |
| Paper #: | 97-08-074 |
| Title: | Redundant Gene Functions and Natural Selection |
| Author(s): | Andreas Wagner |
| Files: | [abstract] [postscript] |
| Paper #: | 97-08-073 |
| Title: | Interaction Games: A Unified Analysis of Incomplete Information, Local Interaction, and Random Matching |
| Author(s): | Stephen Morris |
| Files: | [abstract] [pdf] |
| Paper #: | 97-08-072 |
| Title: | On the Physical Reality of Wave-Particle Duality |
| Author(s): | Huaiyu Zhu |
| Files: | [abstract] [postscript] |
| Paper #: | 97-08-071 |
| Title: | Large-Scale Simulations of Complex Systems, Part I: Conceptual Framework |
| Author(s): | P. M. A. Sloot, A. Schoneveld, J. F. de Ronde, and J. A. Kaandorp |
| Files: | [abstract] [postscript] |
| Paper #: | 97-07-070 |
| Title: | Molecular Evolution of Catalysis |
| Author(s): | Christian V. Forst |
| Files: | [abstract] [pdf] |
| Paper #: | 97-07-069 |
| Title: | Glassy Behavior in an Exactly Solvable Spin Model |
| Author(s): | Cristopher Moore and M. E. J. Newman |
| Files: | [abstract] [gzipped postscript] [postscript] [pdf] |
| Paper #: | 97-07-068 |
| Title: | Sequence Redundancy in Biopolymers: A Study on RNA and Protein Structures |
| Author(s): | Peter Schuster and Peter F. Stadler |
| Files: | [abstract] [postscript] |
| Paper #: | 97-07-067 |
| Title: | Nonlinear Oscillations in Polyps of the Colonial Hydroid Podocoryne Carnea |
| Author(s): | Andreas Wagner, Steven R. Dudgeon, Rimas J. Vaisnys, and Leo W. Buss |
| Files: | [abstract] [postscript] |
| Paper #: | 97-07-066 |
| Title: | Selection Dynamics in Autocatalytic Systems: Templates Replicating Through Binary Ligation |
| Author(s): | Peter R. Wills, Stuart A. Kauffman, Bärbel M. R. Stadler, and Peter F. Stadler |
| Files: | [abstract] [postscript] |
| Paper #: | 97-07-065 |
| Title: | Measures of Statistical Complexity: Why? |
| Author(s): | David P. Feldman and James P. Crutchfield |
| Files: | [abstract] [pdf] |
| Paper #: | 97-07-064 |
| Title: | From Classical Models of Morphogenesis to Agent-Based Models of Pattern Formation |
| Author(s): | Eric Bonabeau |
| Files: | [abstract] [pdf] |
| Paper #: | 97-07-063 |
| Title: | Quantum Automata and Quantum Grammars |
| Author(s): | Cristopher Moore and James P. Crutchfield |
| Files: | [abstract] [postscript] |
| Paper #: | 97-07-062 |
| Title: | The Evolution of Diversity in Replicator Networks |
| Author(s): | Robert Happel and Peter F. Stadler |
| Files: | [abstract] [postscript] |
| Paper #: | 97-07-061 |
| Title: | The Revelation Principle of Bounded Rationality |
| Author(s): | Eduardo Zambrano |
| Files: | [abstract] [pdf] |
| Paper #: | 97-06-060 |
| Title: | Extremist Funding, Centrist Voters, and Candidate Divergence |
| Author(s): | Jordan Rappaport |
| Files: | [abstract] [pdf] |
| Paper #: | 97-06-059 |
| Title: | Adaptive Models and the Power of the Incumbent |
| Author(s): | Scott de Marchi |
| Files: | [abstract] [pdf] |
| Paper #: | 97-06-058 |
| Title: | Inefficient Delays in Strategic Trades |
| Author(s): | Kim-Sau Chung |
| Files: | [abstract] [postscript] |
| Paper #: | 97-06-057 |
| Title: | Win Stay--Lose Shift: An Elementary Learning Rule for Normal Form Games |
| Author(s): | Martin Posch |
| Files: | [abstract] [postscript] |
| Paper #: | 97-06-056 |
| Title: | Self-Organization of Spatial Infrastructure |
| Author(s): | Yuri Yegorov |
| Files: | [abstract] [pdf] |
| Paper #: | 97-06-055 |
| Title: | A Computational Model of Economies of Scale and Market Share Instability |
| Author(s): | Mariana Mazzucato |
| Files: | [abstract] [pdf] |
| Paper #: | 97-06-054 |
| Title: | Voter Turnout, Ideological Candidates, and Platform Setting with Non-Quadratic Preferences |
| Author(s): | John S. Irons |
| Files: | [abstract] [pdf] |
| Paper #: | 97-06-053 |
| Title: | Complexity: A Philosopher’s Reflections |
| Author(s): | Lee McIntyre |
| Files: | [abstract] [pdf] |
| Paper #: | 97-06-052 |
| Title: | Monte Carlo Simulation of Ice Models |
| Author(s): | G. T. Barkema and M. E. J. Newman |
| Files: | [abstract] [postscript] |
| Paper #: | 97-06-051 |
| Title: | High Affinity Memory Cell Production in the Germinal Centers. How Far Can Selection Reach? |
| Author(s): | Michaela Oprea, Eric van Nimwegen, and Alan S. Perelson |
| Files: | [abstract] [pdf] |
| Paper #: | 97-06-050 |
| Title: | Stochastic Modeling and and Optimization of Phage Display |
| Author(s): | Bennett Levitan |
| Files: | [abstract] [postscript] |
| Paper #: | 97-06-049 |
| Title: | Advancing the Art of Simulation in the Social Sciences |
| Author(s): | Robert Axelrod |
| Files: | [abstract] [pdf] |
| Paper #: | 97-04-048 |
| Title: | The Memberships Theory of Inequality: Ideas and Implications |
| Author(s): | Steven N. Durlauf |
| Files: | [abstract] [pdf] |
| Paper #: | 97-05-047 |
| Title: | A Gene-Culture Coevolutionary Model for Brother-Sister Mating |
| Author(s): | Kenichi Aoki and Marcus W. Feldman |
| Files: | [abstract] [postscript] |
| Paper #: | 97-05-046 |
| Title: | Long-Term Evolution, Short-Term Evolution, and Population Genetic Theory |
| Author(s): | IIan Eshel, Marcus W. Feldman, and Aviv Bergman |
| Files: | [abstract] [postscript] |
| Paper #: | 97-05-045 |
| Title: | Life Without Death Is P-Complete |
| Author(s): | David Griffeath and Cristopher Moore |
| Files: | [abstract] [postscript] |
| Paper #: | 97-05-044 |
| Title: | Reflections on How Economic Reasoning Can Contribute to the Study of Science |
| Author(s): | Steven N. Durlauf |
| Files: | [abstract] [pdf] |
| Paper #: | 97-05-043 |
| Title: | Navigating a Nonlinear Environment: An Experimental Study of Decision Making in a Chaotic Setting |
| Author(s): | Diana Richards and Jude C. Hays |
| Files: | [abstract] [gzipped postscript] [postscript] [pdf] |
| Paper #: | 97-05-042 |
| Title: | Dynamics of Games: Aggregate Stability and Individual Learning Rules |
| Author(s): | Jude C. Hays and Diana Richards |
| Files: | [abstract] [pdf] |
| Paper #: | 97-05-041 |
| Title: | Evolving Parallel Computation |
| Author(s): | Kurt Thearling and Thomas Ray |
| Files: | [abstract] [pdf] |
| Paper #: | 97-05-040 |
| Title: | Biased Eukaryotic Gene Regulation Rules Suggest Genome Behavior Is Near Edge of Chaos |
| Author(s): | Stephen E. Harris, Bruce Kean Sawhill, Andrew Wuensche, and Stuart A. Kauffman |
| Files: | [abstract] [postscript] |
| Paper #: | 97-05-039 |
| Title: | Phase Transitions in Logic Networks |
| Author(s): | Bruce Kean Sawhill and Stuart A. Kauffman |
| Files: | [abstract] [postscript] |
| Paper #: | 97-05-038 |
| Title: | Fitness Distance Correlation Analysis: An Instructive Counterexample |
| Author(s): | Lee Altenberg |
| Files: | [abstract] [postscript] |
| Paper #: | 97-05-037 |
| Title: | Genotypes with Phenotypes: Adventures in an RNA Toy World |
| Author(s): | Peter Schuster |
| Files: | [abstract] [postscript] |
| Paper #: | 97-04-036 |
| Title: | Statistical Dynamics of the Royal Road Genetic Algorithm |
| Author(s): | Erik van Nimwegen, James P. Crutchfield, and Melanie Mitchell |
| Files: | [abstract] [pdf] |
| Paper #: | 97-04-035 |
| Title: | Lattice Gas Prediction is P-Complete |
| Author(s): | Kristian Lindgren, Cristopher Moore, and Mats G. Nordahl |
| Files: | [abstract] [postscript] |
| Paper #: | 97-04-034 |
| Title: | The Emergence of Pillars, Walls, and Royal Chambers in Termite Nests |
| Author(s): | Eric Bonabeau, Guy Theraulaz, Jean-Louis Deneubourg, Nigel R. Franks, Oliver Rafelsberger, Jean-Louis Joly, and and Stephanie Blanco |
| Files: | [abstract] [pdf] |
| Paper #: | 97-04-033 |
| Title: | Self-Organization in Social Insects |
| Author(s): | Eric Bonabeau, Guy Theraulaz, Jean-Louis Deneubourg, Serge Aron, and Scott Camazine |
| Files: | [abstract] [pdf] |
| Paper #: | 97-04-032 |
| Title: | A Formal Model of Theory Choice in Science |
| Author(s): | William A. Brock and Steven N. Durlauf |
| Files: | [abstract] [pdf] |
| Paper #: | 97-04-031 |
| Title: | RNA Structures with Pseudo-Knots |
| Author(s): | Peter F. Stadler and Christian Haslinger |
| Files: | [abstract] [postscript] |
| Paper #: | 97-03-030 |
| Title: | Complex Adaptations and the Structure of Recombination Spaces |
| Author(s): | Günter P. Wagner and Peter F. Stadler |
| Files: | [abstract] [postscript] |
| Paper #: | 97-03-029 |
| Title: | Using Microsimulation Feedback for Trip Adaptation for Realistic Traffic in Dallas |
| Author(s): | Kai Nagel and Cristopher L. Barrett |
| Files: | [abstract] [pdf] |
| Paper #: | 97-03-028 |
| Title: | Experiences with a Simplified Microsimulation for the Dallas/Fort Worth Area |
| Author(s): | M. Rickert and Kai Nagel |
| Files: | [abstract] [pdf] |
| Paper #: | 97-03-027 |
| Title: | New Monte Carlo Algorithms for Classical Spin Systems |
| Author(s): | G. T. Barkema and M. E. J. Newman |
| Files: | [abstract] [pdf] |
| Paper #: | 97-03-026 |
| Title: | Power Laws in the Size Distribution of Gene Families in Complete Genomes: Biological Interpretations |
| Author(s): | Martijn A. Huynen and Erik van Nimwegen |
| Files: | [abstract] [postscript] |
| Paper #: | 97-03-025 |
| Title: | Diffusion Constant for the Repton Model of Gel Electrophoresis |
| Author(s): | M. E. J. Newman and G. T. Barkema |
| Files: | [abstract] [postscript] |
| Paper #: | 97-03-024 |
| Title: | Complexity of Two-Dimensional Patterns |
| Author(s): | Kristian Lindgren, Cristopher Moore, and Mats Nordahl |
| Files: | [abstract] [postscript] |
| Paper #: | 97-03-023 |
| Title: | On Irreversible Radiation Processes |
| Author(s): | Huaiyu Zhu |
| Files: | [abstract] [postscript] |
| Paper #: | 97-03-022 |
| Title: | Quantum Theory and Irreversibility |
| Author(s): | Huaiyu Zhu |
| Files: | [abstract] [postscript] |
| Paper #: | 97-03-021 |
| Title: | A Possible Solution to the Problem of Time in Quantum Cosmology |
| Author(s): | Stuart A. Kauffman and Lee Smolin |
| Files: | [abstract] [pdf] |
| Paper #: | 97-03-020 |
| Title: | A General Model for the Origin of Allometric Scaling Laws in Biology |
| Author(s): | Geoffrey B. West, James H. Brown, and Brian J. Enquist |
| Files: | [abstract] [postscript] |
| Paper #: | 97-03-019 |
| Title: | Scientific Understanding of Dynamic Phenomena: Analytic/Recursive/Holistic Relationships |
| Author(s): | E. Atlee Jackson |
| Files: | [abstract] [postscript] |
| Paper #: | 97-03-018 |
| Title: | Deriving Shape Space Parameters from Immunological Data for a Model of Cross-Reactive Memory |
| Author(s): | Derek J. Smith, Stephanie Forrest, Ron R. Hightower, and Alan S. Perelson |
| Files: | [abstract] [postscript] |
| Paper #: | 97-02-017 |
| Title: | The Effects of Tag-Mediated Selection of Partners in Evolving Populations Playing the Iterated Prisoner's Dilemma |
| Author(s): | Rick L. Riolo |
| Files: | [abstract] [postscript] |
| Paper #: | 97-02-016 |
| Title: | Stability and Complexity on a Lattice: Coexistence of Species in an Individual-Based Food Web Model |
| Author(s): | Timothy H. Keitt |
| Files: | [abstract] [pdf] |
| Paper #: | 97-02-015 |
| Title: | On Information and Sufficiency |
| Author(s): | Huaiyu Zhu |
| Files: | [abstract] [postscript] |
| Paper #: | 97-02-014 |
| Title: | A Model of Mass Extinction |
| Author(s): | M. E. J. Newman |
| Files: | [abstract] [postscript] |
| Paper #: | 97-02-013 |
| Title: | Rediscovering Computational Autopoiesis |
| Author(s): | Barry McMullin and Francisco J. Varela |
| Files: | [abstract] [gzipped postscript] [postscript] [pdf] |
| Paper #: | 97-02-012 |
| Title: | A Single-Blind Controlled Competition Among Tests for Nonlinearity and Chaos |
| Author(s): | William A. Barnett, A. Ronald Gallant, Melvin J. Hinich, Jochen A. Jungeilges, Daniel T. Kaplan, , andark J. Jensen |
| Files: | [abstract] [postscript] [pdf] |
| Paper #: | 97-02-011 |
| Title: | Secondary Structure of the 3'-Non-Coding Region of Flavivirus Genomes: Comparative Analysis of Base Pairing Probabilities |
| Author(s): | Susanne Rauscher, Cristoph Flamm, Christian W. Mandl, Franz X. Heinz, and Peter F. Stadler |
| Files: | [abstract] [gzipped postscript] [postscript] |
| Paper #: | 97-02-010 |
| Title: | Does Evolutionary Plasticity Evolve? |
| Author(s): | Andreas Wagner |
| Files: | [abstract] [gzipped postscript] [postscript] [pdf] |
| Paper #: | 97-02-009 |
| Title: | On Emergence and Explanation |
| Author(s): | Nils A. Baas and Claus Emmeche |
| Files: | [abstract] [pdf] |
| Paper #: | 97-02-008 |
| Title: | Circuits and Expressions with Non-Associative Gates |
| Author(s): | Joshua Berman, Arthur Drisko, Francois Lemieux, Cristopher Moore, and Denis Therien |
| Files: | [abstract] [postscript] |
| Paper #: | 97-01-007 |
| Title: | A Markov Model of Production, Trade, and Money: Theory and Artificial Life Simulation |
| Author(s): | Herbert Gintis |
| Files: | [abstract] [gzipped postscript] [postscript] [pdf] |
| Paper #: | 97-01-006 |
| Title: | Correlation Analysis of the Synchronizing-CA Landscape |
| Author(s): | Wim Hordijk |
| Files: | [abstract] [postscript] |
| Paper #: | 97-01-005 |
| Title: | Individual Adaptation in a Path-Based Simulation of the Freeway Network of Northrhine-Westfalia |
| Author(s): | Kai Nagel |
| Files: | [abstract] [postscript] |
| Paper #: | 97-01-004 |
| Title: | Models and Search Strategies for Applied Molecular Evolution |
| Author(s): | Bennett Levitan |
| Files: | [abstract] [postscript] |
| Paper #: | 97-01-003 |
| Title: | SCL: An Artificial Chemistry in Swarm |
| Author(s): | Barry McMullin |
| Files: | [abstract] [gzipped postscript] [postscript] [pdf] |
| Paper #: | 97-01-002 |
| Title: | Computational Autopoiesis: The Original Algorithm |
| Author(s): | Barry McMullin |
| Files: | [abstract] [gzipped postscript] [postscript] [pdf] |
| Paper #: | 97-01-001 |